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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
BRCA rs60032974 chr2:86500531 T/C 2.61E-6 1025 21.97 19.47 12.17 KM Plot
BRCA rs6004941 chr22:26518189 A/C 8.41E-8 1028 11.27 21.35 21.62 KM Plot
BRCA rs6005923 chr22:29252365 A/C 3.29E-6 1028 7.33 14.87 23.07 KM Plot
BRCA rs60228288 chr18:44640412 G/A 2.12E-5 1022 21.57 22.2 18.13 KM Plot
BRCA rs60295664 chr2:86496591 G/A 2.61E-6 1026 21.95 19.47 12.17 KM Plot
BRCA rs6037025 chr20:25101705 T/C 2.98E-5 1015 22.17 22.03 14.5 KM Plot
BRCA rs6037028 chr20:25111888 C/T 1.03E-5 1026 21.93 22.13 14.42 KM Plot
BRCA rs6037029 chr20:25113239 C/T 9.34E-6 1028 14.67 23.07 21.57 KM Plot
BRCA rs6037030 chr20:25120101 C/T 6.93E-6 1023 22.2 22.92 13.17 KM Plot
BRCA rs6037031 chr20:25120118 A/T 6.93E-6 1022 22.3 22.92 13.17 KM Plot
BRCA rs6037396 chr20:2754867 T/C 1.04E-5 1022 22.2 20.53 12.5 KM Plot
BRCA rs6037397 chr20:2755060 A/G 1.22E-5 1028 12.5 20.2 22.2 KM Plot
BRCA rs6037398 chr20:2755199 G/A 1.25E-5 1024 22.17 20.73 12.32 KM Plot
BRCA rs6037402 chr20:2757862 A/G 1.03E-5 1019 22.2 20.73 12.32 KM Plot
BRCA rs6037403 chr20:2757864 C/A 1.03E-5 1019 22.2 20.73 12.32 KM Plot